Document Type


Date of Degree


Degree Name

PhD (Doctor of Philosophy)

Degree In


First Advisor

Sonya J. Franklin

First Committee Member

Amnon Kohen

Second Committee Member

Claudio Margulis

Third Committee Member

Jan-Uwe Rohde

Fourth Committee Member

Timothy Tewson


Many histidine-rich sites in proteins bind transition metal ions such as Zn2+, natively. Such sites can encourage proper protein folding or allow access to enzymatic capabilities such as hydrolysis. Ru(II) and Tc(I) also bind to aromatic amines providing access to unique chemistries not observed in biology. Ru(II) complexes have shown efficacy in fighting cancer and catalysis, while 99mTc complexes are used in radio-imaging. To incorporate such metal-ions' activities into proteins, several mutants have been designed to bind Zn2+, Ru2+, and Tc1+ by introducing three histidines onto their surfaces. The first design, Z0, utilized a chimeric approach by substituting a turn in engrailed homeodomain for the superimposable Zn2+-binding loop of astacin. In the second design, 3HT-C, three histidine residues were incorporated into the N-terminus of the Trp-cage. The final scaffold, ubiquitin, was used to make two mutants: 3HIU with a 3-histidine containing loop inserted between residues 9 and 10, and 3HPU with 3-histidine point mutations near residues 35-38. Z0 proved unstable due to incorporation of a hydrophobic patch onto its surface and was not able to be isolated in sufficient quantities for study. However, the other proteins were stable and soluble. Zn2+-binding by 3HT-C was investigated by intrinsic tryptophan fluorescence quenching, circular dichroism, and RP-HPLC. Binding by 3HIU and 3HPU was studied by CD. All designed proteins bind to Zn2+ with Kd values in the micromolar range. 3HIU and 3HPU were further studied for their ability to bind Ru(tacn)2+ complexes. While addition of Ru-complexes caused oligomerization to various extents depending upon reaction conditions, homogeneous Ru-protein monomers were purified by a combination of size-exclusion, cation-exchange and immobilized-metal affinity chromatographies. Ru-binding was confirmed by ESI-MS, and structural integrity was investigated by CD. Results indicate that Ru(tacn)2+ complexes can be bound to surface binding sites in proteins without disruption of structure, opening the door for the study of catalysis in a protein context. 99mTc(CO)3+-binding studies were performed with 3HIU by RP-HPLC. This protein binds Tc+ and resists substitution by free L-histidine, suggesting that peptidic Tc-binding tags could be designed with this approach to readily incorporate the radionuclide into any protein expression system.


Protein Design, Protein Engineering, Technetium Protein, Ruthenium Protein, Zinc Protein


xix, 134 pages


Includes bibliographical references (pages 129-134).


Copyright 2008 Samantha Lynn Soebbing

Included in

Chemistry Commons